The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-PPDPFL-2:2

Chromosome

chr8

Gene Name

lnc-PPDPFL-2

Start

49168082

CPC Label

noncoding

End

49193253

Cancer

BRCA-Luminal A

Strand

+

Peptide

IHSELVSR

Modified Peptide

n[145]IHSELVSR

Peptide Length

8

ORF Length

58

Open Reading Frame (ORF)

MEQDYYLQIGGKGQQKPRIHSELVSRGSGELSGVDGVLTEHATLGLQLRDPKRQPTLS

Conservation Score

0.117

PhyloCSF Frame 1

0

No. of Spectra

29

CPC Coding Probability

0.0293846

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.997

PhyloCSF Frame 3

0

CNTI Score

-0.37006628