The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-POU5F1-11:1

Chromosome

chr6

Gene Name

lnc-POU5F1-11

Start

31224341

CPC Label

noncoding

End

31225058

Cancer

OSCC

Strand

-

Peptide

LCQMRIMQGSSVMGSIASR

Modified Peptide

n[145]LCQM[147]RIM[147]QGSSVMGSIASR

Peptide Length

19

ORF Length

34

Open Reading Frame (ORF)

LCQMRIMQGSSVMGSIASRSVLVSCLMRQMSPPR

Conservation Score

1

PhyloCSF Frame 1

-5.159

No. of Spectra

1

CPC Coding Probability

0.0155726

PhyloCSF Frame 2 

6.224

CNTI Index

noncoding

Max Probability

0.2468

PhyloCSF Frame 3

-5.385

CNTI Score

-0.376286822