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McDonnell Genome Institute
Washington University
Transcript
lnc-ABCA1-11:1
Chromosome
chr9
Gene Name
lnc-ABCA1-11
Start
105693391
CPC Label
noncoding
End
105695173
Cancer
BRCA-Luminal A
Strand
-
Peptide
RGGGAALR
Modified Peptide
n[145]RGGGAALR
Peptide Length
8
ORF Length
90
Open Reading Frame (ORF)
LVPRARAVRSRRGHSRGRPLLRAGSSSARAPWRRGGGAALRGSRRLTGARRVGGASGFPAAPAGSCLGSPSKGPASSWSWAQCRTWRACR
Conservation Score
1
PhyloCSF Frame 1
-0.551
No. of Spectra
116
CPC Coding Probability
0.0259388
PhyloCSF Frame 2
-1.624
CNTI Index
noncoding
Max Probability
0.9973
PhyloCSF Frame 3
-1.512
CNTI Score
-0.288422687
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