top of page
McDonnell Genome Institute
Washington University
Transcript
LINC00471:2
Chromosome
chr2
Gene Name
LINC00471
Start
231492646
CPC Label
coding
End
231514377
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
FNVDWSK
Modified Peptide
n[145]FNVDWSK
Peptide Length
7
ORF Length
257
Open Reading Frame (ORF)
MLNMQSLSVLKEHTLRHYYETNHSKNHDGYTEKMRDKKLNKLKKRLRFQHDLLLNVNKIGDAAMECSYILSEKIARASKPFTDGEFIKECLLNAAEIMCPEQRQAFANIRLTGNIIAQHVDDMAENLQDRFQEKVKSFVAFSIAAHGNTDINNAPQLAVFIRGVDETFDVTEELLDMVPITGTASGNDIFLCVEKSLKKFNVDWSKLVSVSTDGNSAMVGVKQLVTKLNLRWQGFAKAQNLSVCMASFSRNHFVLKS
Conservation Score
1
PhyloCSF Frame 1
-0.49
No. of Spectra
3
CPC Coding Probability
0.964297
PhyloCSF Frame 2
-1.319
CNTI Index
coding
Max Probability
0.1652
PhyloCSF Frame 3
-3.619
CNTI Score
0.660811594
bottom of page