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McDonnell Genome Institute
Washington University
Transcript
ATP2A1-AS1:12
Chromosome
chr16
Gene Name
ATP2A1-AS1
Start
28868383
CPC Label
coding
End
28879916
Cancer
BRCA-Basal-like
Strand
-
Peptide
AGLGGLKR
Modified Peptide
n[145]AGLGGLKR
Peptide Length
8
ORF Length
196
Open Reading Frame (ORF)
MEPKSPALGRGPVVCDGSLSRASACTIKDALGQQGSGSMGEGFRPPLSLPSPISRAGLGGLKRVERVGLAHTKEYWLLMALGWPPSSPSPPSGDCCSCTIGGTPASPPDPAPWASEPGAMASSNSTTGTSSTTGTSSSGTPPPPAFSFSCLSLAAAAAAAATSGALDASSAPGCGGSVHEGGSGGWGGSWEVVGSG
Conservation Score
1
PhyloCSF Frame 1
9.443
No. of Spectra
11
CPC Coding Probability
0.961333
PhyloCSF Frame 2
4.977
CNTI Index
noncoding
Max Probability
0.9929
PhyloCSF Frame 3
6.859
CNTI Score
-0.301811518
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