McDonnell Genome Institute

Washington University

Transcript

ZEB1-AS1:11

Chromosome

chr10

Gene Name

ZEB1-AS1

Start

31316527

CPC Label

noncoding

End

31319030

Cancer

BRCA-HER2-enriched

Strand

-

Peptide

LDSPGSSLDEGKGR

Modified Peptide

n[145]LDSPGSSLDEGKGR

Peptide Length

14

ORF Length

125

Open Reading Frame (ORF)

LYPVPSELPLRAPRGPRLPASWRQGYHQSHASRVRPPHPGAKERDRGLDSPGSSLDEGKGRFGDGEDTRRPERGYLTRAARTPFPSLPGTPGFPPSEPGWEVTSMRLNFSWIEREARSSACQQPP

Conservation Score

1

PhyloCSF Frame 1

-0.926

No. of Spectra

1

CPC Coding Probability

0.104052

PhyloCSF Frame 2 

-0.123

CNTI Index

noncoding

Max Probability

0.6137

PhyloCSF Frame 3

-0.34

CNTI Score

-0.31714799