The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

VLDLR-AS1:13

Chromosome

chr9

Gene Name

VLDLR-AS1

Start

2496115

CPC Label

noncoding

End

2622387

Cancer

OV

Strand

-

Peptide

LDGAAAAAAAAVR

Modified Peptide

n[145]LDGAAAAAAAAVR

Peptide Length

13

ORF Length

128

Open Reading Frame (ORF)

LGPARRRRGASSLTGSGGAALPGRPAQREQQPERPERGRAHGARLDGAAAAAAAAVRSARQVTSPSERRKKVGAGRGKGEKEGKELAGEGSGEEEGTPSPTTCTVSSPPTQPPPRAAAAVQAEPAGRK

Conservation Score

1

PhyloCSF Frame 1

4.827

No. of Spectra

14

CPC Coding Probability

0.366769

PhyloCSF Frame 2 

2.077

CNTI Index

noncoding

Max Probability

0.8709

PhyloCSF Frame 3

6.381

CNTI Score

-0.26463466