McDonnell Genome Institute

Washington University

Transcript

TRHDE-AS1:24

Chromosome

chr12

Gene Name

TRHDE-AS1

Start

72240842

CPC Label

noncoding

End

72272580

Cancer

BRCA-Basal-like

Strand

-

Peptide

EGPLAAIK

Modified Peptide

n[145]EGPLAAIK

Peptide Length

8

ORF Length

46

Open Reading Frame (ORF)

MSAAKEGPLAAIKESLLMNNKYLKVKGKEPNSIFKSQNSAVGKYHR

Conservation Score

0.142

PhyloCSF Frame 1

-4.374

No. of Spectra

2

CPC Coding Probability

0.0920477

PhyloCSF Frame 2 

-5.446

CNTI Index

coding

Max Probability

0.9994

PhyloCSF Frame 3

-6.523

CNTI Score

0.686215034