McDonnell Genome Institute

Washington University

Transcript

TPM1-AS:6

Chromosome

chr15

Gene Name

TPM1-AS

Start

63046033

CPC Label

coding

End

63049387

Cancer

OV

Strand

-

Peptide

AGGLQWERPAAALR

Modified Peptide

n[145]AGGLQWERPAAALR

Peptide Length

14

ORF Length

266

Open Reading Frame (ORF)

MLLPEPSQHHPFPLGAFTLDQRDGKQRLRRTGRAPPQSPPPAGPGAPGAPWRRGDEGPGPAGGEAGGPCGAAPGGCASGGCGVMGVSLTVSLSFLSWSSSRCRVPARSSAASACSCRLRIFLRTASSELLPAIAPDGRRAGGLQWERPAAALRTRLPRLSWLPSAGPPRPGLSVRWRRPLRPGAVRKSQPPGLRRQTAGGRARLGGARAVDPGTGWGHCACSRRRGERRSRRAAGVPGELGAPGGHCTRALASTSRAPPRRGGDPG

Conservation Score

1

PhyloCSF Frame 1

5.71

No. of Spectra

2

CPC Coding Probability

0.795359

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.6157

PhyloCSF Frame 3

10.815

CNTI Score

-0.262181564