McDonnell Genome Institute

Washington University

Transcript

TNFRSF14-AS1:24

Chromosome

chr1

Gene Name

TNFRSF14-AS1

Start

2550282

CPC Label

noncoding

End

2554150

Cancer

HCC

Strand

-

Peptide

ELGARPGGLPGGSR

Modified Peptide

n[230]ELGARPGGLPGGSR

Peptide Length

14

ORF Length

193

Open Reading Frame (ORF)

MASPLTPNQDPGPQLCSPPHLPCDQLLTSRGLGVSVAGTFLRPSPPAPLCPTTQASPTWVPALQGAPRSVSMIRTLTRTQLAPFLPDIRALEAHSHPSLVHSHRPGTFNIPTFQVRKPRHRELGARPGGLPGGSRGVSDLRRGSGGLSRHRALPSRFSRDRAQGEGTSRPGSIHGPLTLGKGLSQGRPQVTAP

Conservation Score

0.027

PhyloCSF Frame 1

-4.184

No. of Spectra

5

CPC Coding Probability

0.341491

PhyloCSF Frame 2 

-4.163

CNTI Index

noncoding

Max Probability

0.8657

PhyloCSF Frame 3

-4.946

CNTI Score

-0.269715569