McDonnell Genome Institute

Washington University

Transcript

TBX2-AS1:4

Chromosome

chr17

Gene Name

TBX2-AS1

Start

61393453

CPC Label

noncoding

End

61399926

Cancer

BRCA-Basal-like

Strand

-

Peptide

GGLGEGVGSLSSK

Modified Peptide

n[145]GGLGEGVGSLSSK

Peptide Length

13

ORF Length

197

Open Reading Frame (ORF)

LIADFTLFGPIVGLRGRGFDSSGQAPAGRGGLGEGVGSLSSKKTCQQNKILTNDGPPGPETPPPAPAPTARPRLRLPAPDWRARRADLTRRKGLRRGEPGSRGLGEGPAAARRPQVQSIDTTPSGEGAPSFSRAQRPGRSGPSPSLASDPAPGRGAAWGSLRPGKRQQALESEAGGRASREARAAEVRERIPGGGSW

Conservation Score

1

PhyloCSF Frame 1

7.571

No. of Spectra

2

CPC Coding Probability

0.0146092

PhyloCSF Frame 2 

4.769

CNTI Index

coding

Max Probability

0.7007

PhyloCSF Frame 3

2.724

CNTI Score

0.723333737