McDonnell Genome Institute

Washington University

Transcript

TBX2-AS1:10

Chromosome

chr17

Gene Name

TBX2-AS1

Start

61393455

CPC Label

noncoding

End

61399606

Cancer

BRCA-Luminal B

Strand

-

Peptide

GLRRGEPGSR

Modified Peptide

n[145]GLRRGEPGSR

Peptide Length

10

ORF Length

159

Open Reading Frame (ORF)

LPAPDWRARRADLTRRKGLRRGEPGSRGLGEGPAAARRPQVQSIDTTPSGEGAPSFSRAQRPGRSGPSPSLASDPAPGRGAAWGSLRPGKRQQALESEAGGRASREARAAEVRERIPGGGSWCPGRRDWLMPPCAGSSSQLTEPSVIQQPSISAPNMPN

Conservation Score

1

PhyloCSF Frame 1

7.571

No. of Spectra

1

CPC Coding Probability

0.012473

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.1107

PhyloCSF Frame 3

-0.508

CNTI Score

-0.29276231