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McDonnell Genome Institute
Washington University
Transcript
SOX2-OT:70
Chromosome
chr3
Gene Name
SOX2-OT
Start
180989772
CPC Label
noncoding
End
181058745
Cancer
HCC
Strand
+
Peptide
QHSLLKGR
Modified Peptide
n[230]QHSLLKGR
Peptide Length
8
ORF Length
38
Open Reading Frame (ORF)
MLAIKLKIFHLLRFLPLLISNFVKQHSLLKGRKLSIGS
Conservation Score
1
PhyloCSF Frame 1
-4.529
No. of Spectra
2
CPC Coding Probability
0.0459737
PhyloCSF Frame 2
-4.115
CNTI Index
noncoding
Max Probability
0.8535
PhyloCSF Frame 3
-5.723
CNTI Score
-0.360420512
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