The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

SOX2-OT:46

Chromosome

chr3

Gene Name

SOX2-OT

Start

181699594

CPC Label

noncoding

End

181836879

Cancer

OV

Strand

+

Peptide

DILSLTLSPR

Modified Peptide

n[145]DILSLTLSPR

Peptide Length

10

ORF Length

37

Open Reading Frame (ORF)

MDILSLTLSPRLECSGAILAHCNRHFPGSSGSPASAS

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

2

CPC Coding Probability

0.0629422

PhyloCSF Frame 2 

0.836

CNTI Index

noncoding

Max Probability

0.9996

PhyloCSF Frame 3

0

CNTI Score

-0.384256969