McDonnell Genome Institute

Washington University

Transcript

SMC2-AS1:2

Chromosome

chr9

Gene Name

SMC2-AS1

Start

104080023

CPC Label

noncoding

End

104092474

Cancer

HCC

Strand

-

Peptide

GTYESSCLK

Modified Peptide

n[230]GTYESSCLK

Peptide Length

9

ORF Length

57

Open Reading Frame (ORF)

MKVHPLIQQIIEYLQKFLLYGAYIVVNINSYFMDYKTELFATILHYPRGTYESSCLK

Conservation Score

1

PhyloCSF Frame 1

-4.775

No. of Spectra

4

CPC Coding Probability

0.0522384

PhyloCSF Frame 2 

-4.41

CNTI Index

noncoding

Max Probability

0.9995

PhyloCSF Frame 3

-4.748

CNTI Score

-0.386810294