McDonnell Genome Institute

Washington University

Transcript

SLC12A5-AS1:5

Chromosome

chr20

Gene Name

SLC12A5-AS1

Start

46013501

CPC Label

noncoding

End

46022073

Cancer

BRCA-Luminal B

Strand

-

Peptide

LDTGPVGGK

Modified Peptide

n[145]LDTGPVGGK

Peptide Length

9

ORF Length

39

Open Reading Frame (ORF)

LDTGPVGGKGRAAPPQSPLPHPHNPASSPILEQIQLVPN

Conservation Score

1

PhyloCSF Frame 1

3.409

No. of Spectra

28

CPC Coding Probability

0.239978

PhyloCSF Frame 2 

-4.28

CNTI Index

noncoding

Max Probability

0.9994

PhyloCSF Frame 3

-1.804

CNTI Score

-0.264070749