McDonnell Genome Institute

Washington University

Transcript

SATB1-AS1:24

Chromosome

chr3

Gene Name

SATB1-AS1

Start

18465982

CPC Label

noncoding

End

18527638

Cancer

LUAD

Strand

+

Peptide

LNSTIFCFIK

Modified Peptide

n[230]LNSTIFCFIK

Peptide Length

10

ORF Length

43

Open Reading Frame (ORF)

LNSTIFCFIKNISYLIFLTNKSIQKCLIQSSSHQELRYYLRII

Conservation Score

0.314

PhyloCSF Frame 1

-6.705

No. of Spectra

1

CPC Coding Probability

0.0206569

PhyloCSF Frame 2 

-5.721

CNTI Index

noncoding

Max Probability

0.5548

PhyloCSF Frame 3

-5.99

CNTI Score

-0.439811233