McDonnell Genome Institute

Washington University

Transcript

MIR34AHG:5

Chromosome

chr1

Gene Name

MIR34AHG

Start

9179630

CPC Label

noncoding

End

9198703

Cancer

BRCA-Basal-like

Strand

-

Peptide

GAFSQPGPEVNAR

Modified Peptide

n[145]GAFSQPGPEVNAR

Peptide Length

13

ORF Length

123

Open Reading Frame (ORF)

MVAKNSHERERKSASVTKVALSKRSRLWKTFALEEGNGRGAFSQPGPEVNARAPCWLEPCPACEPPVGKETEGRWSLEFLAPGLEQQVPVLLRPPLSGYVDGACSTDRAHASAPPCFCVRWGT

Conservation Score

0.058

PhyloCSF Frame 1

-3.13

No. of Spectra

8

CPC Coding Probability

0.216977

PhyloCSF Frame 2 

-3.6

CNTI Index

noncoding

Max Probability

0.9964

PhyloCSF Frame 3

-2.591

CNTI Score

-0.314823657