top of page

McDonnell Genome Institute

Washington University

Transcript

LINC02279:3

Chromosome

chr14

Gene Name

LINC02279

Start

94960276

CPC Label

coding

End

94962976

Cancer

OSCC

Strand

-

Peptide

DYWRSSSGVIRSSPSPPLAFHFNSEICTR

Modified Peptide

n[145]DYWRSSSGVIRSSPSPPLAFHFNSEICTR

Peptide Length

29

ORF Length

116

Open Reading Frame (ORF)

LSAVSRAGSELSLPSGEVIKKSPIFIFLQARLPREESPWEDARSPVDPGSSWRMSLLRDYWRSSSGVIRSSPSPPLAFHFNSEICTRQIPQTLTEPLPRSRTMLRNWSTFPHLTLL

Conservation Score

1

PhyloCSF Frame 1

-1.956

No. of Spectra

1

CPC Coding Probability

0.55136

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.3196

PhyloCSF Frame 3

0

CNTI Score

-0.377397248

bottom of page