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McDonnell Genome Institute
Washington University
Transcript
LINC01780:11
Chromosome
chr1
Gene Name
LINC01780
Start
119327413
CPC Label
noncoding
End
119335388
Cancer
BRCA-Luminal B
Strand
+
Peptide
GLEWMFSLPVR
Modified Peptide
n[145]GLEWMFSLPVR
Peptide Length
11
ORF Length
135
Open Reading Frame (ORF)
LALASASPPWLAAALAGPANSGCPRSLSLRPAPERRALTFSLQPGVSHVASGPGDGAAEELIAVTPDFSERGRSWGEILKLGIDLWTKSLMGQLNSKLNVPRDEPSFFLGVSRGLEWMFSLPVRLQVLYLETVSP
Conservation Score
1
PhyloCSF Frame 1
-2.455
No. of Spectra
59
CPC Coding Probability
0.106577
PhyloCSF Frame 2
-3.735
CNTI Index
noncoding
Max Probability
0.9967
PhyloCSF Frame 3
-2.129
CNTI Score
-0.274448082
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