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McDonnell Genome Institute

Washington University

Transcript

LINC01534:2

Chromosome

chr19

Gene Name

LINC01534

Start

36685439

CPC Label

noncoding

End

36687449

Cancer

OSCC

Strand

-

Peptide

RTTQLPCLDQLCIPLQDLMGTWVPIISR

Modified Peptide

n[145]RTTQLPCLDQLCIPLQDLM[147]GTWVPIISR

Peptide Length

28

ORF Length

49

Open Reading Frame (ORF)

LNHPASTRPTADSCHMNMISRRTTQLPCLDQLCIPLQDLMGTWVPIISR

Conservation Score

0.995

PhyloCSF Frame 1

-5.269

No. of Spectra

1

CPC Coding Probability

0.0400573

PhyloCSF Frame 2 

-2.501

CNTI Index

noncoding

Max Probability

0.7109

PhyloCSF Frame 3

-4.358

CNTI Score

-0.314278324

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