top of page

McDonnell Genome Institute

Washington University

Transcript

LINC01284:2

Chromosome

chrX

Gene Name

LINC01284

Start

51095843

CPC Label

noncoding

End

51171400

Cancer

BRCA-HER2-enriched

Strand

-

Peptide

LHGWLFR

Modified Peptide

n[145]LHGWLFR

Peptide Length

7

ORF Length

36

Open Reading Frame (ORF)

LHGWLFRTICGLPDTSSAWVASGNTTTASMHTTWTS

Conservation Score

0.049

PhyloCSF Frame 1

-5.01

No. of Spectra

1

CPC Coding Probability

0.125276

PhyloCSF Frame 2 

-2.773

CNTI Index

noncoding

Max Probability

0.9993

PhyloCSF Frame 3

-4.513

CNTI Score

-0.373758185

bottom of page