top of page

McDonnell Genome Institute

Washington University

Transcript

LINC00963:43

Chromosome

chr9

Gene Name

LINC00963

Start

129482939

CPC Label

coding

End

129513066

Cancer

BRCA-Luminal B

Strand

+

Peptide

MNINTAVIK

Modified Peptide

n[145]MNINTAVIK

Peptide Length

9

ORF Length

255

Open Reading Frame (ORF)

MNINTAVIKMQGRSRMDAAASGARGSAESLQAGEARSSPAKSGAGLRGLGPGRAGVGTFFVVPSVPSRRPRPRPAAASPRPAPGRPPGRRFPEPAPSRPRGRLMSSAHNFPLPGPSRGPESSPPPAPTLACGVCLCRARPRRPGLTSGWQGLERPRIAAPWGQDDTAGGRGQGTPSESGFEAGRLTWGKCFQLSELRFLICQLADAQQIFLDSRGELYSWVNRGPEMAKGPSKVVQPPGITILFCRVTRCHPRVT

Conservation Score

1

PhyloCSF Frame 1

0.861

No. of Spectra

1

CPC Coding Probability

0.584638

PhyloCSF Frame 2 

2.367

CNTI Index

noncoding

Max Probability

0.5985

PhyloCSF Frame 3

3.437

CNTI Score

-0.262512604

bottom of page