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McDonnell Genome Institute
Washington University
Transcript
LINC00543:5
Chromosome
chr13
Gene Name
LINC00543
Start
27953525
CPC Label
coding
End
27955370
Cancer
CCRC
Strand
+
Peptide
ISPGNPGQRRRPSK
Modified Peptide
n[230]ISPGNPGQRRRPSK
Peptide Length
14
ORF Length
400
Open Reading Frame (ORF)
LLCEATPPETHPQPSALGQEARKATEAAERGRGAPLSPSCGGSGCPCSASRSPPGVPALRSAAELGTEAAGSRPFRPLSRSSSAACRGPRAGETGQTPEAAGGCSFDGPNTPALPFRLLKIKSLGPGATIAQPRSSTTGRRPVLQAFFTEWLRRLRPRFPAPPRRSCAHLLKSLASSGIRTKTTADITPFQRRKRKCPESQGATSGATGGGGEALPGLPTRQEAAAPGPRLPSPRATSRETPRISPGNPGQRRRPSKDRQQAETGRLGREQRDTSPRAPAGSAGRLWAQGSCAPSGLGGRSRSPGPAAAGSGRDWSAPAAGEGAGRRCLSSICSNGWGRSAEILEYQAERFPKACCRQRAHLSMCKEQISSIFLSKTFKDSNLDNSFSEVEVLGVGGGWE
Conservation Score
1
PhyloCSF Frame 1
0.074
No. of Spectra
18
CPC Coding Probability
0.54849
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.998
PhyloCSF Frame 3
0
CNTI Score
0.748381568
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