top of page

McDonnell Genome Institute

Washington University

Transcript

LINC00482:5

Chromosome

chr17

Gene Name

LINC00482

Start

81299219

CPC Label

coding

End

81309250

Cancer

OSCC

Strand

-

Peptide

APGPCGSVGQALPTSAFLSPPTSPR

Modified Peptide

n[145]APGPCGSVGQALPTSAFLSPPTSPR

Peptide Length

25

ORF Length

121

Open Reading Frame (ORF)

LHSSLGHTDRDSISKQTNKQTNKKPPKNQNKKTRLRLSRAPGPCGSVGQALPTSAFLSPPTSPRHSFLKQARACRGFHRSWGPAFLWWELWGRGCLGARCGRRRSLTTDVQRVQQTHALGD

Conservation Score

0.024

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.696444

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.8751

PhyloCSF Frame 3

0

CNTI Score

-0.25334807

bottom of page