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The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

LINC00472:2

Chromosome

chr6

Gene Name

LINC00472

Start

71414250

CPC Label

noncoding

End

71420803

Cancer

BRCA-Luminal A

Strand

-

Peptide

RLEGGER

Modified Peptide

n[145]RLEGGER

Peptide Length

7

ORF Length

226

Open Reading Frame (ORF)

LGPVAYRPLLAEAVQTFPPAVPAPRQHLSTLLFSPPPPAGPGSAGCGREDAGPGAVSPSAVRRAAKRLEGGERHTKNAVGGGGERGRQLLPAPAGATAGRACSEAAQTMRPGSSPRAPECGAPALPRPQLDRLPARPAPSRGRGAPSLRWPAKEVGPRPQIPATCEPGKVCGASAGRRDAARPSRPRSSRVTFSTRRQPGPQRGRWGLRGGPESVRGLPHLGLREH

Conservation Score

1

PhyloCSF Frame 1

4.203

No. of Spectra

4

CPC Coding Probability

0.0973838

PhyloCSF Frame 2 

-1.835

CNTI Index

noncoding

Max Probability

0.9998

PhyloCSF Frame 3

-0.562

CNTI Score

-0.263336694

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