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McDonnell Genome Institute

Washington University

Transcript

LINC00200:1

Chromosome

chr10

Gene Name

LINC00200

Start

1159767

CPC Label

noncoding

End

1164672

Cancer

EOGC

Strand

+

Peptide

AGGLGAEQRPAAK

Modified Peptide

n[145]AGGLGAEQRPAAK

Peptide Length

13

ORF Length

155

Open Reading Frame (ORF)

LCPYLKSHSFRSEHLRGQGSFTCHLPSHCVIGEGPSGPSGSCGKKWSHQVIQGPGSLPRKAGGLGAEQRPAAKVGSSPAGVAAPSQGTCPSKCWCCSHYRWGWFHWTGGTSSPLALWTHGRHFPGHITWVCGLAAGSTRVLNHDLACKLFPQLDK

Conservation Score

0.156

PhyloCSF Frame 1

-5.159

No. of Spectra

1

CPC Coding Probability

0.297293

PhyloCSF Frame 2 

-3.777

CNTI Index

noncoding

Max Probability

0.6674

PhyloCSF Frame 3

-3.783

CNTI Score

-0.312976671

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