top of page

McDonnell Genome Institute

Washington University

Transcript

LINC00174:21

Chromosome

chr7

Gene Name

LINC00174

Start

66423201

CPC Label

coding

End

66427153

Cancer

EOGC

Strand

-

Peptide

AVDVELAK

Modified Peptide

n[145]AVDVELAK

Peptide Length

8

ORF Length

160

Open Reading Frame (ORF)

LLKLQSFDGEIFAVDVEIAKQSVTIKTTLEDLGMDDEGDDPVPLPNVNAAVLKKVIQWCTHHKDDPPPPEDDENKEKQTDDIPVWDQEFLKVAQGTLFELIRAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK

Conservation Score

1

PhyloCSF Frame 1

-2.924

No. of Spectra

1

CPC Coding Probability

0.949602

PhyloCSF Frame 2 

-4.621

CNTI Index

coding

Max Probability

0.9549

PhyloCSF Frame 3

-3.552

CNTI Score

0.733626469

bottom of page