top of page

McDonnell Genome Institute

Washington University

Transcript

LIFR-AS1:5

Chromosome

chr5

Gene Name

LIFR-AS1

Start

38558829

CPC Label

noncoding

End

38671216

Cancer

OV

Strand

+

Peptide

VWNFPQMSSFIK

Modified Peptide

n[145]VWNFPQMSSFIK

Peptide Length

12

ORF Length

68

Open Reading Frame (ORF)

LEKVWNFPQMSSFIKRKASFDDNTFTKWRPLKTLVWIEELEKNEVHINQTEEKQFGGGKNQFFMKGSH

Conservation Score

1

PhyloCSF Frame 1

-4.85

No. of Spectra

1

CPC Coding Probability

0.0331106

PhyloCSF Frame 2 

-3.373

CNTI Index

noncoding

Max Probability

0.9911

PhyloCSF Frame 3

-4.274

CNTI Score

-0.359418645

bottom of page