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McDonnell Genome Institute
Washington University
Transcript
HOXC-AS3:1
Chromosome
chr12
Gene Name
HOXC-AS3
Start
53983950
CPC Label
noncoding
End
53985519
Cancer
BRCA-Luminal A
Strand
-
Peptide
RPLQSAR
Modified Peptide
n[145]RPLQSAR
Peptide Length
7
ORF Length
71
Open Reading Frame (ORF)
LPRGNIPGKKEGTCGASVSLEESRITRETSTQDATKPDPEKRPLQSARAGSMFERRQTSLFLWLFLNKRKK
Conservation Score
0.987
PhyloCSF Frame 1
-4.119
No. of Spectra
6
CPC Coding Probability
0.0128007
PhyloCSF Frame 2
-1.339
CNTI Index
noncoding
Max Probability
0.9983
PhyloCSF Frame 3
-0.665
CNTI Score
-0.355577901
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