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McDonnell Genome Institute
Washington University
Transcript
GATA6-AS1:20
Chromosome
chr18
Gene Name
GATA6-AS1
Start
22157258
CPC Label
noncoding
End
22168903
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
VDLFRPR
Modified Peptide
n[145]VDLFRPR
Peptide Length
7
ORF Length
172
Open Reading Frame (ORF)
LGRRPPLVSKVRGQLLKVIVFFVGIYIFSFPSFPFFFSFTLACLLFRDLLILNETVLSGLFRPNERPLLGKSSPLPSQRAGSRARPVPRVDLFRPRHTTIRDSNPPRTLQPIGQGAGAWLPNGKGVWGPSLAPLPEERRDPARTRVPVHLHPRKLTLILRSCHKTGCFGDVS
Conservation Score
1
PhyloCSF Frame 1
0.828
No. of Spectra
2
CPC Coding Probability
0.15345
PhyloCSF Frame 2
-0.828
CNTI Index
noncoding
Max Probability
0.8748
PhyloCSF Frame 3
-0.691
CNTI Score
-0.300311533
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