top of page

McDonnell Genome Institute

Washington University

Transcript

CCDC183-AS1:4

Chromosome

chr9

Gene Name

CCDC183-AS1

Start

136807960

CPC Label

noncoding

End

136841182

Cancer

EOGC

Strand

-

Peptide

GLVRPHQLLQGGK

Modified Peptide

n[145]GLVRPHQLLQGGK

Peptide Length

13

ORF Length

157

Open Reading Frame (ORF)

LDLLCGDVLLHERPALQAVPQRCLARVPVSPDHYLHVVLHPLGEAPLQRLVHGLQPGGDVLVPARGLVRPHQLLQGGKHLPARTSQPGRGRRAQRRRGRGATGTMSRRPRPPRRPEPARPEAGVPAAERSPERRLGNLSRGCSAPAPAASGATALQE

Conservation Score

1

PhyloCSF Frame 1

15

No. of Spectra

1

CPC Coding Probability

0.181771

PhyloCSF Frame 2 

-2.984

CNTI Index

coding

Max Probability

0.2771

PhyloCSF Frame 3

-3.534

CNTI Score

0.731518517

bottom of page