top of page
McDonnell Genome Institute
Washington University
CircRNA
chr1|11500989|11502897|+|PTCHD2|ENST00000294484.6
Cancer
Type of Peptide
HCC
noncanonical_peptide
Highest Probability Peptide Matching Spectra
No. of Spectra
0.9981
55
No. of Amino Acids from 5' Exons
No. of Amino Acids from 3' Exons
4
3
Peptide
AHSQSER
Amino Acids from 5' Exons
TMDTEDDPLLQDVWLEEEQEEEEATGETFLGAQKPGPQPGAGGQCCWRHWPLASRPPASGFWSTLGWAFTNPCCAGLVLFLGCSIPMALSAFMFLYYPPLDIDISYNAFEIRNHEASQRFDALTLALKSQFGSWGRNRRDLADFTSETLQRLISEQLQQLHLGNRSRQASRAPRVIPAASLGGPGPYRDTSAAQKPTANRSGRLRRETPPLEDLAANQSEDPRNQRLSKNGRYQPSIPPHAAVAANQSRARRGASRWDYSRAYVSANTQTHAHWRIELIFLARGDAERNIFTSERLVTIHEIERKIMDHPGFREFCWKPHEVLKDLPLGSYSYCSPPSSLMTYFFPTERGGKIYYDGMGQDLADIR,LWTRRMTPCCRMCGRRSRRRKKQRVKPFGPRSQGPNLGQGDSVAGGTGPWLPDPQLRASGVPWAGPSPIRAVLGWCSSWAAASPWPCQPSCSFTTHRWTLTSPTTPLRSATTRPHSVSTLSLWRLSPSLDPGGGTGAIWPTSPPRRFSALSQSSCSSCISATARGKPPEPPASSPRPHSVAQALTGTLPRLKSPQPIGAGDFGVRPRPWRIWQPTRVKTRETSGARMGGTSPASRPTRQSRPIRAVPAEAPRAGTTRAPMVPTLRRTRTGASSSSSWRAATRSATFSPVSAWSRSMRSSARSWTTQASGSSAGSPTRCSRICRWAPTPTARPPARSPTFFPPRGAARSTMTAWARTWRTSG,YGHGGPLAAGCVARGGAGGGRSNGNLFRGPEARAPTWGRGTVLLAALAPGFPTPSFGLLEYPGLGLHQSVLCWAGALPGLQHPHGPVSLHVPLLPTAGHHLLQRLDPQPRGLTAFRRSHSGAVPVWILGAEPARFGRLHLRDASAPYLRAAAAAASRQPLAASLPSPPRHPRGLTRWPRPLPGHFRGSKAHSQSERATSADPAPGGSGSQPERPAKPAAEQEWAVPAQHPAPRGSRGQSEPCPPRRLALGLLARLCECQHSDARALAHRAHLPGARRRGAQHFHQAPGHDPDRAQDHGPPRLPGVLLEAPRGAQGSAAGLLLLLLAPQLAHDLLFSHREGRQDLLRHGPGPGGHP
Amino Acids from 3' Exons
APWSWPLTLSSTGMWMRASLQTIRAPSCAVRSCLEHPCPTTTQMTAGRNNGLSFRASWSPTWPCWPSSLP,LPGAGHDSPVLLVCGGPLCRQSEELPPAQDPVWSTPAQLLLSRPLGGTTGVSELRGHLRGHAGQAVYQ,SLELAMTHPEFYWYVDEGLSADNLKSSLLRSEILFGAPLPNYYSVDDRWEEQRAKFQSFVVTYVAMLAKQST
bottom of page